PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn191781
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family MYB_related
Protein Properties Length: 464aa    MW: 50610.2 Da    PI: 5.4034
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn191781genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.81.2e-085984127
                     TSSS-HHHHHHHHHHHHHTTTT-HHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktI 27
                     r rWT+eE+ ++++a k++G   W++I
       Achn191781 59 RERWTEEEHNKFIEALKLYGRA-WRRI 84
                     78******************88.**99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.56E-64785IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.0E-65987IPR009057Homeodomain-like
PfamPF002499.1E-65984IPR001005SANT/Myb domain
CDDcd001676.96E-46184No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MAIQDQYGGS QSNTVVPTGN GTSLDVGTHS VNAAKLEEQF LSGNVTPKVR KPYKITKQRE  60
RWTEEEHNKF IEALKLYGRA WRRIEGNGDA SAVQPIEIPA PRPKRKPTHP YPRKLVAPLK  120
TGSLVEEQQR SSASPNLSVS EQENQSSTSV LSAIGSETLG LTDTNTPNGS LSPISSGDGV  180
NPGGFFLSEP NSSPNSSPEE TGSLLEVKSP TSSAPAEQVS VNLELFPQDG AFVKEESSEV  240
ASIQSLKLFG KTVLVTDSQR LSLPAMETCK SLPSFMNDER PVPTPWNLMP TEFSNWNTEG  300
PWNPAAFYYM RFPNENSKPG NGDSGSPLPC WAYYGGMPFP CPPLHYLVPT KAPQASVSGQ  360
TQNREDQKEG SRTSSNTGSA NASDMNWEVE TQSRRLSSDK EEKGQQSTTL VKPSDNLSFS  420
DQRAILDKCL KGFVPYKRCL AERDTSSTIT GAEREEQRIR LCL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002267976.21e-139PREDICTED: protein REVEILLE 1
TrEMBLA5C7G81e-136A5C7G8_VITVI; Putative uncharacterized protein
STRINGVIT_04s0079g00410.t011e-130(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31852447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17300.11e-41MYB_related family protein